The faded SG are great guitars for the money. But to me, something about the nicer gloss finish on the Standards DOES change the tone, and makes it feel more substantial. If you get the Faded, though, you're at $600. Add $200 for some pickups, $100 for a fret level and nut work (maybe more) and $60 for tuners. So now you're getting close to the $1K mark.
I'm getting the feeling that you're not buying this SG to be a collectors piece, nor are you buying it to be a vintage-correct replica. You're getting it to be a player.
That being said... I'd vote for a Warmoth.
I built this sucker, and it clocked in a little under $1K. Plays and sounds amazing. Totally my dream guitar. So I built another one to match it in cherry sunburst - finishing it up this weekend.
Warmoths DO require a pro fret level 90% of the time, but the fact that you can pick your neck shape, frets, finishes, inlays, etc, etc... There's a real sense of satisfaction in playing a guitar that is 100% designed to your exact specs. Even if it's kind of a no-name guitar. You can get any option you want. How about a maple neck satin finish, with a gloss body? how about a body made of swamp ash?
The possiblities are endless.
NOTE: If you're not handy, HAVE SOMEONE ELSE DO IT. Lots of people complain about their Warmoths. My first question is: WHO put it together, and how much do they know about guitars? A hack job putting it together will result in a hack guitar.
Here's mine: